Marlin Tyre and Mechanical Workshop Software enables merchant fees to be automatically taken out of EFT payments.
Merchant Fees are payments made by businesses to payment processors for accepting card transactions (usually a percentage of the transaction value).
- Most merchant fees are charged on a periodic basis (e.g. monthly) and can simply be paid when due, using journals or supplier payments.
- However, some payment processors (e.g. Amex) charge a percentage per transaction.
If required, per-transaction merchant fees can be set up to be automatically taken out of payment type transactions and deposited in the Merchant Fee account.
Merchant fees are not Surcharges, which are what businesses charge customers to recover costs such as merchant fees, and are added on top of the sale price at checkout.
From 1 October 2026, the RBA has banned surcharges on all card payments (including Visa, Mastercard and EFTPOS). However merchant fees can still be charged to businesses by payment providers.
If businesses want to recuperate their merchant fee costs, they must now include them in the standard sticker price for each product, rather than as separate merchant fees.
For more information, see the Reserve Bank of Australia's FAQ page.
EFT Merchant Fees
To set up merchant fees on EFT payments, select Master Files > Accounts > Bank Accounts from the menu bar.

The Bank Accounts Search module will open on the Search window, showing a list of available bank accounts linked with the current company.

The company filter in the top right of the Search list can be used to show bank accounts for other companies available to the user.
Open the bank account the desired EFT terminal is linked with in Edit mode.
The bank account window will open on the Details tab.

The EFT Types list at the bottom can be used to set the customer merchant fee rate and merchant fee account.
In the Customer Merchant Fee Rate cell, enter the merchant fee rate as a percentage.
Use the picker in the Merchant Fee Account cell to select the GL account the merchant fee will be posted to.
Only revenue accounts with Allow Sales and Allow Purchases disabled can be selected as merchant fee accounts.
To save the merchant fee and return to the Search window, click on the Save action button to the top right of the bank account Details tab.